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Marine Ecological Field Methods

A Guide for Marine Biologists and Fisheries Scientists

 

 

Edited by

Anne Gro Vea Salvanes

Department of Biology, University of Bergen
Bergen, Norway

Jennifer Devine

Institute of Marine Research (IMR)
Bergen, Norway

Knut Helge Jensen

Department of Biology, University of Bergen
Bergen, Norway

Jon Thomassen Hestetun

Department of Biology, University of Bergen
Bergen, Norway

Kjersti Sjøtun

Department of Biology, University of Bergen
Bergen, Norway

Henrik Glenner

Department of Biology, University of Bergen
Bergen, Norway

 

 

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List of Contributors

Dag L. Aksnes
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway

Lars Asplin
Institute of Marine Research (IMR), Bergen, Norway

Martin Dahl
Institute of Marine Research (IMR), Bergen, Norway

Jennifer Devine
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway;
Institute of Marine Research (IMR), Bergen, Norway

Arill Engås
Institute of Marine Research (IMR), Bergen, Norway

Tone Falkenhaug
Institute of Marine Research, Flødevigen, His, Norway

Svein Rune Erga
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway

Keno Ferter
Institute of Marine Research (IMR), Bergen, Norway

Henrik Glenner
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway

Jon Thomassen Hestetun
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway

Mette Hordnes
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway

Ragnhild Aakre Jakobsen
Hunstadsvingen, Bergen, Norway

Knut Helge Jensen
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway

Frank Midtøy
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway

Leif Nøttestad
Institute of Marine Research (IMR), Bergen, Norway

Egil Ona
Institute of Marine Research (IMR), Bergen, Norway

Michael Pennington
Institute of Marine Research (IMR), Bergen, Norway

David John Rees
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway

Shale Rosen
Institute of Marine Research (IMR), Bergen, Norway

Anne Gro Vea Salvanes
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway

Kjersti Sjøtun
Department of Biology, University of Bergen (BIO, UiB), Bergen, Norway

Arved Staby
Institute of Marine Research (IMR), Bergen, Norway

Foreword

Despite covering over 70% of the surface of the planet, the marine environment is less accessible, and thus less well‐known than terrestrial habitats. A variety of technologies allow for marine field studies on environments ranging from the shallow nearshore to depths of thousands of meters, on individuals, populations, communities, and ecosystems. This book describes marine ecological sampling equipment, methods, and analysis, ranging from physical parameters to fish, microalgae, zooplankton, benthos, and macroalgae. It will be useful for graduate students and early‐stage professionals in marine biology and fisheries, even those not directly involved in fieldwork, by giving an overview of marine biological data collection, handling and analysis.

This handbook provides a guide to the use of marine ecological sampling methods used for pure research and for fisheries management purposes. The book covers survey and sampling design, sample and data collection and processing, and data analysis. The research question and characteristics of the organisms and habitat dictate what sampling equipment is required. Information is included on sampling equipment, ranging from those that are useful in shallow nearshore areas, such as bottles, secchi discs, and gillnets or beach seines to those deployed from large research ships for studies offshore, such as remotely operated vehicles (ROVs), fishing trawls, and hydroacoustics, or remote observation using satellites.

The development of this book started at the Department of Biology at the University of Bergen in 2011; when due to lack of suitable literature, students attending a marine field course were provided with short handouts. The handouts became more and more advanced from year to year. In 2014 the publisher Wiley became aware of the initiative and invited us to write a textbook for broader use. The six editors of the book have, over several years, been involved in the writing and development of the book project. As we came across additional themes relevant for the handbook, and that we ourselves felt we did not know well enough, we invited experts from our network at the Institute of Marine Research and the Department of Biology at the University of Bergen to contribute as co‐authors. The editors have produced text, and in addition taken the lead on the structure, contents, and in the editing of the entire manuscript. All editors have worked on the full text. A.G.V. Salvanes has had the main responsibility for coordinating the work, J. Devine has had the final edit on all chapters, J.T. Hestetun was mainly responsible for keeping references organized and for quality evaluation of figures. All artwork was produced by R. Jakobsen. We hope the handbook will help reader to plan and execute fieldwork to answer research questions, and provide basic knowledge of the most common methods for collecting field data for modern marine research. We also hope the handbook will enable readers to explain and evaluate the principles of different sampling approaches, their strengths and weaknesses, and not least how to process, catalog, and interpret collected field samples and experimental data.

The provided R code with this book (http://filer.uib.no/mnfa/mefm/) is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version. If the code and data are used for teaching (or other) purposes, we ask those using the material to reference the textbook. The code is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

Bergen, January 20, 2017

Anne Gro Vea Salvanes
Jennifer Devine
Knut Helge Jensen
Jon Thomassen Hestetun
Kjersti Sjøtun
Henrik Glenner

Acknowledgements

The editors acknowledge the Olav Thon Foundation for funding which made the completion of this book possible. Thanks especially to the many students on our marine field courses that over years have inspired us to write this book. We are particularly grateful to the 2016 master students on the Ocean Science Course (BIO325) at the Department of Biology, University of Bergen. They tested out and gave us valuable input to improve the draft version of the book: M.V. Bjordal, A. Delaval, C. Djønne, N.E. Frogg, K.F. Furseth, S. Hjelle, J.S. Høie, I. Nilsen, D. Notvik, H. Seal, M.R. Solås, E. Tessin, and S. Tonheim. G.J. Macaulay, Institute of Marine Research and L.H. Pettersson; Nansen Environmental and Remote Sensing Center are thanked for professional help and production of topographic and remote sensing maps. We thank T. Klevjer, J.H. Vølstad, and K. Korsbrekke, Institute of Marine Research for comments and B.H. Bjørnhaug, Bergen Technology Transfer Office for help with contract issues. Many colleagues and companies are thanked for illustrations; Aanderaa, G. Anderson, Santa Barbara, Fagbokforlaget, Institute of Marine Research, T. Hovland, G. Macaulay, K. Mæstad, R.D.M. Nash, Ø. Paulsen, Scantrol/Deep Vision, H. Saivolainen, H.R. Skjoldal, Son Tec, E. Svendsen, T. Sørlie, G. Sætra, University of Bergen Library. We thank: A. Hobæk, Norwegian Institute for Water Research; C. Todt, Rådgivende Biologer AS; M. Malaquias, University Museum of Bergen; L. and P. Buhl‐Mortensen, Institute of Marine Research, H.T. Rapp and K. Meland, University of Bergen, T. Dahlgren, University of Gothenburg, and U. Båmstedt, Umeå University, for valuable contributions to benthic studies. Our special thanks goes to the crew onboard the research vessels; RV Håkon Mosby, RV G.O. Sars, RV Hans Brattstrøm and RV Dr. Fritjof Nansen; the crew are experts and have deep knowledge on operating advanced as well as the simple gears used to sample marine organisms. We could not have done our research or field courses without their skills and support.